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a. Order mutants     b .Expression Pattern Lines Help
03Z11JO59
General information
This line was generated from rice cultivar Zhonghua 11.
Reporter gene: GFP.
Seed status: available.
Abiotic stress
All the T1 seeds were normal to abscisic acid treatment as compared with control during germination (by You Jun).
Flanking Sequence
 
  • Entry_ prefix Types
    		•
     

    ATL

    ATosL

    ATosR

    ITL

    ITR

     

    TTL

    TTR

    TTosL

    TTosR

    HTL

  • Entry_postfix Types (different primer id)
    •  

    AC1

    ADS-2

    LBT2

    TRB2

    ULB3

     

    XLB3

    XRB3

    URB4

    PFRB4

    NTLB5

     

    TosRS

    SP6

    T7

     

     

  • Additional remarks for Entry_prefix
    •   The first letter means methods for flanking sequence
    ⊕A: Adaptor-PCR ⊕T: TAIL-PCR ⊕I: Inverse-PCR ⊕H: Hi TAIL-PCR
    The middle letters means TAGs
    ⊕T: T-DNA ⊕Tos: Tos17
    The last letter means Left or Right
  • Mutant phenotype(s) mentioned in this entry may not be necessarily linked to the gene(s) identified by the following flanking       sequence(s) due to possible multiple insertions.
  • Blue color is used for rice genomic sequence and orange for vector sequence. Black color is used for neither vector nor rice       genomic sequence that could be caused by recombination.
    		•
    		 
    TTL _03Z11JO59 _NTLB5
    Sequence1|Possible location: Chromosome 3 (by Yangying)
TCATAGATCCTGCGAGTGAGTAACAGTTTGTTGCTTGAATTCTCACATGCAAATTGAATGGCATCTTGCCACATCATGAC
    GCCAAGCATATGGAGGCAAGAGGGGGAGAGGTAGAAATAACTTGTTTACTGTATTTCTGAACCAACGTAGAGTAACGTAG
    AGCGCGGCGCAACAATGACCGTATGATGCAAGGTCGGTCAGATACGCAAGCCCCTTTACCTCGCTTCAGTCCTTAGTCCT
    TACTCCGATCCTGTGCACTGCCCAAAAGTCTCTAAACTGCGTGCTTAAACTGCGCGAGTTCGAGCTCCGGATTTCGATTC
    GGGCGGCAAGATTTAAAACTTTTTAAATTTACTACAGGCTTACGGAATACAGCCCATCGCGTCCATATATATACACGTAC
    ACTCGCGACCAAACTTAAACACAAATCACAAAGCCACAAACCCGACTTGTGAACCACTGACTTCTGATATGCTCAACACA
    TGA
    TTR _03Z11JO59 _PFRB4
    Sequence2|Possible location: Chromosome 3 (by YangYing)
TCATAGATCCTGCGAGTGAGTAACAGTTTGTTGCTTGAATTCTCACATGCAAATTGAATGGCATCTTGCCACATCATGAC
    GCCAAGCATATGGAGGCAAGAGGGGGAGAGGTAGAAATAACTTGTTTACTGTATTTCTGAACCAACGTAGAGTAACGTAG
    AGCGCGGCGCAACAATGACCGTATGATGCAAGGTCGGTCAGATACGCAAGCCCCTTTACCTCGCTTCAGTCCTTAGTCCT
    TACTCCGATCCTGTGCACTGCCCAAAAGTCTCTAAACTGCGTGCTTAAACTGCGCGAGTTCGAGCTCCGGATTTCGATTC
    GGGCGGCAAGATTTAAAACTTTTTAAATTTACTACAGGCTTACGGAATACAGCCCATCGCGTCCATATATATACACGTAC
    ACTCGCGACCAAACTTAAACACAAATCACAAAGCCACAAACCCGACTTGTGAACCACTGACTTCTGATATGCTCAACACA
    TGA
    ATL _03Z11JO59 _LBT2
    Sequence3|Possible location: Chromosome 3 (by YangYing)
GACGCTGGCTGCGTGTAGTCTCGGTGTCGAGTAAGGGTGCTCTCTTTGGCGCGAGTGTACGTGTATATAAAAGGACGCGA
    TGGGCTGTATTCCGTAAGCCTGTAGTAAATTTACCTCCCCGGCGGCCGCTCTTGTACTATATAGACTCTGATTATTATTC
    CTTACGTTTAATAAATCCTGCTTCTTTTTAAATGTATATTTCATTAATATATAATTATATTTACCCTTTTTTTTAATATT
    TAATCATCATATATAGTTTTTTATTTTTTTTTTTTAAAATTACATAATATTTAAATTTCTTATTTAATCTTATATTTTTT
    TTTTTTTTTTTTCCATTTTTTTTTTTTAATTTTTGTTTTTTATTTAATTTTTAATTGAAATTCC
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