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a. Order mutants     b .Expression Pattern Lines Help
05NPBNT37
General information
This line was generated from rice cultivar Nipponbare.
Reporter gene: GUS.
Seed status:not available.
No details for this record.
Flanking Sequence
 
  • Entry_ prefix Types
    		•
     

    ATL

    ATosL

    ATosR

    ITL

    ITR

     

    TTL

    TTR

    TTosL

    TTosR

    HTL

  • Entry_postfix Types (different primer id)
    •  

    AC1

    ADS-2

    LBT2

    TRB2

    ULB3

     

    XLB3

    XRB3

    URB4

    PFRB4

    NTLB5

     

    TosRS

    SP6

    T7

     

     

  • Additional remarks for Entry_prefix
    •   The first letter means methods for flanking sequence
    ⊕A: Adaptor-PCR ⊕T: TAIL-PCR ⊕I: Inverse-PCR ⊕H: Hi TAIL-PCR
    The middle letters means TAGs
    ⊕T: T-DNA ⊕Tos: Tos17
    The last letter means Left or Right
  • Mutant phenotype(s) mentioned in this entry may not be necessarily linked to the gene(s) identified by the following flanking       sequence(s) due to possible multiple insertions.
  • Blue color is used for rice genomic sequence and orange for vector sequence. Black color is used for neither vector nor rice       genomic sequence that could be caused by recombination.
    		•
    		 
    ATL _05NPBNT37 _LBT2
    Sequence1|Possible location: Chromosome 9 (by ChenLin)
AACCGCTATGTGTGAGCATTAGGAATCCAGCTAGGGTAAAATTTCTAATTGCTGAAACCAAATAAAGAACTAAAATCCAG
    ATCCCCCGAATTAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTT
    GTTTACACGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCA
    TGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTCGGCACCGTAACCAGG
    CTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCCCGATTCCGTGGCGCGGCTCAC
    CGGAGCAGCCGCGCCGTCCTACCTATTTACCTCCCCGGCGGCCGCTCGAGAGCTATAGACCCCCGCAGCCGCTCCCACAC
    TATAGAATTTGGAACCATGAGGCGGAAACAAGTAAGCCAAAAACCTAATATGCTCAACCATGAGCGAAACCCCTATATGC
    GAAACACATGATCGAAACCCTAATATGCTAATCCGTTGGTGAACCCATTA
    ATosR _05NPBNT37 _TosRS
    Sequence2|Possible location: Chromosome 10 (by Ma Zhen)
CGCGGGGGCCGCGGGGGGCCCGCGGCGCCGGCCCGGGGGCCCGAGGAGGGGCCGCACCGGCGGGGCCGGCGGGCGCGGGC
    CGCGGGCGGGGGCGGGGCGCCCCCCCGGGGGGGGCGCGGGGGAGGCCGGGGAGAGTATCGCCTTGGGAATACAACCTCCC
    CGGGGGCGACAAGATGAAACCGATGATGCTCTCTAGTTTCTCTCTAGGTGAAAAAATCCCCGACTTGTACCTCGAAGGTA
    CATTTTGTAAATTTATTGTTGACTGCTGACAATGATAACGTGTGAAAGATGCATATAATTTTAAATCTAATCTGTTATCC
    CTAAACATTTTTTAACTTTGTTTTTTTTGTCTTTACGAGTTTTTAGGGAGTATTTCAATTGCATTGTGTATGCAAGGTTG
    CAAAATTGGCTATATTTTCCCCTTATCATTTTACCTATATTTTTTATAGTTCTATAGTTTTTTTTCCTTTATGCTGCTTT
    CATGATTAAATTTTTTTCTCAAAATTTGTTCCCCAATTTCCCCCTTTTTACCCCGTAAACTTTATTTTTTATTGAACTGT
    AATTGTATTACACTAAGGTCATAAATCTCAAAATAAATTGCCGAATTGGCAACTCGGCGGTAAAGAAAAAGTTGATCTCC
    ACTACCATTAAAAAAATTTTTCAATAGAGCGCTTATGGCAGATCAATTTACCAAGAACAAGGGCTATAAAACTCCAATAG
    ATGAAAGATAAAGTCGAGGATGCATGTAGAGACAAATTACATATTAAAAAAGAAGAGCATTTATGGACTATTAGCCCGAG
    ATCCATCCATCGGCATACACGGAATCATTGGATGTTGCGTCTAGTTAAGATGAAAATTCGCTACAACTATACTGCGAAGA
    TTGACCTTGCCATAGAGCAACGCACATAGCCGTCAAATAGAACTCAAGGTTGCTATCATACCATTGATAGAACGATTAGA
    CAACATATGCTATCTTGA
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    Update by Zhang Chengjun, E-mail:rmd_order@mail.hzau.edu.cn
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