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a. Order mutants     b .Expression Pattern Lines Help
04Z11BS08
General information
This line was generated from rice cultivar Zhonghua 11.
Reporter gene: GFP.
Seed status: available but not enough.
Abiotic stress
All the T1 plants were normal to low phosphorus treatment as compared with control (by He Liyuan).
Expression
The expression of reporter gene was not detected in stem node, stem internode, lemmapalea, stamen, pistil, lodicule, rachilla, collar, leaf sheath, ligule, collar, leaf sheath, ligule, embryo, endosperm and lemma/palea for T0 plant (by Li Caishun).
Flanking Sequence
 
  • Entry_ prefix Types
  •  

    ATL

    ATosL

    ATosR

    ITL

    ITR

     

    TTL

    TTR

    TTosL

    TTosR

    HTL

  • Entry_postfix Types (different primer id)
  •  

    AC1

    ADS-2

    LBT2

    TRB2

    ULB3

     

    XLB3

    XRB3

    URB4

    PFRB4

    NTLB5

     

    TosRS

    SP6

    T7

     

     

  • Additional remarks for Entry_prefix
  •   The first letter means methods for flanking sequence
    ⊕A: Adaptor-PCR ⊕T: TAIL-PCR ⊕I: Inverse-PCR ⊕H: Hi TAIL-PCR
    The middle letters means TAGs
    ⊕T: T-DNA ⊕Tos: Tos17
    The last letter means Left or Right
  • Mutant phenotype(s) mentioned in this entry may not be necessarily linked to the gene(s) identified by the following flanking       sequence(s) due to possible multiple insertions.
  • Blue color is used for rice genomic sequence and orange for vector sequence. Black color is used for neither vector nor rice       genomic sequence that could be caused by recombination.
  •  
    TTL _04Z11BS08 _NTLB5
    Sequence1|Possible location: Chromosome 2 (by You Changjun)
    TCCGCATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACAATATATCCTGCCACCAGCCAGCCAACAGCTCC
    CCGACCGGCAGCTCGGCACAAAATCACCACTCGATACAGGCAGCCCATCAGTCCGGGACGGCGTCAGCGGGAGAGCCGTT
    GTAAGGCGGCAGACTTTGCTCTTGTTAGTTATGCTATTCGGAAGAACGGCAACTAACCTGCCGGGTTTGAAACACGGATG
    ATCGCGCGTAGGGTACCATGTTGATTGTAACAATGACAAAACGTTGCTGCCTGTGATCAATTCGGGCACGAACCCAGTGG
    ACATAAGCCTGTTCGGTTCGTAAGCTGTAATGCAAGTAGCGTATGCGCTCACGCAACTGGTCCAGAACCTTGACCGAACG
    CAGCGGTGGTAACGGCGCAATGGCGGTTTTCATGGCTTGTTATGACTGTTTTTTTGGGGTACAGTCTATGCCTCGGGCAT
    CCAAGCAGCAGGATACATAGCAAACCAAGTGATATTAACAGTTAAAAGTACCGTTGTTGCTCAATTGACCAGTAAACTCG
    ACAGACAATTGTAAACATAAAAAATATATACCTTAAGAAACAAACCGTCTACGCATAAAAATTTCTCTGTGGCCTCTTAA
    GCGATCATCCCTTCTCTTGTTCGTGCTGTTATCCAAAGCTGGCTTGCCATTCTGTGCCCTTCCTCATAGGGTGTGGATAT
    TCATTCCATGTCATCATTTATTTAATGTAATCCTTTCTATATGTCCAGGAAGGGGCAAAAACGAGCATCCACACCTACGT
    GGTCTCAAAGAACTGTAGTACATATTATGCACACATCTAGAGCGAGCCCTTAAACTGATGTTGAGGTTCAAACTGGTGAT
    CAGCCAGAAAAAAACCTACATAGCATCATAACCACACCCGGATCAGTAATGTTCTCCATCAAGAAATCGTGGAAGGAGGA
    TGAAGCTAAACAATCTTGTGACACAGAGTCCCTGTCTAGATTGATGGAGGCCCTATTCTCTGGCGGGTTCATACAGGGAG
    TATGTTCCGCCCAAAAAGGCCGAGAAGGTACCTTGAAATGACCCTTGGGT
    TTL _04Z11BS08 _NTLB5
    Sequence2|Possible location: Chromosome 2 (by Zhang Jian)
    TCCGCATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACACCACAATATATCCTGCCACCAGCCAGCCAACAGCTCC
    CCGACCGGCAGCTCGGCACAAAATCACCACTCGATACAGGCAGCCCATCAGTCCGGGACGGCGTCAGCGGGAGAGCCGTT
    GTAAGGCGGCAGACTTTGCTCTTGTTAGTTATGCTATTCGGAAGAACGGCAACTAACCTGCCGGGTTTGAAACACGGATG
    ATCGCGCGTAGGGTACCATGTTGATTGTAACAATGACAAAACGTTGCTGCCTGTGATCAATTCGGGCACGAACCCAGTGG
    ACATAAGCCTGTTCGGTTCGTAAGCTGTAATGCAAGTAGCGTATGCGCTCACGCAACTGGTCCAGAACCTTGACCGAACG
    CAGCGGTGGTAACGGCGCAATGGCGGTTTTCATGGCTTGTTATGACTGTTTTTTTGGGGTACAGTCTATGCCTCGGGCAT
    CCAAGCAGCAGGATACATAGCAAACCAAGTGATATTAACAGTTAAAAGTACCGTTGTTGCTCAATTGACCAGTAAACTCG
    ACAGACAATTGTAAACATAAAAAATATATACCTTAAGAAACAAACCGTCTACGCATAAAAATTTCTCTGTGGCCTCTTAA
    GCGATCATCCCTTCTCTTGTTCGTGCTGTTATCCAAAGCTGGCTTGCCATTCTGTGCCCTTCCTCATAGGGTGTGGATAT
    TCATTCCATGTCATCATTTATTTAATGTAATCCTTTCTATATGTCCAGGAAGGGGCAAAAACGAGCATCCACACCTACGT
    GGTCTCAAAGAACTGTAGTACATATTATGCACACATCTAGAGCGAGCCCTTAAACTGATGTTGAGGTTCAAACTGGTGAT
    CAGCCAGAAAAAAACCTACATAGCATCATAACCACACCCGGATCAGTAATGTTCTCCATCAAGAAATCGTGGAAGGAGGA
    TGAAGCTAAACAATCTTGTGACACAGAGTCCCTGTCTAGATTGATGGAGGCCCTATTCTCTGGCGGGTTCATACAGGGAG
    TATGTTCCGCCCAAAAAGGCCGAGAAGGTACCTTGAAATGACCCTTGGGT
    ATL _04Z11BS08 _LBT2
    Sequence3|Possible location: Chromosome 3 (by Ma Zhen)
    ATTTGTATTTGTAAAATACTTCTATCAATAAAATTTCTAATTCCTAAAACCAAAATCCAGTACTAAAATCCAGATCCCCC
    GAATTAATTCGGCGTTAATTCAGTACATTAAAAACGTCCGCAATGTGTTATTAAGTTGTCTAAGCGTCAATTTGTTTACA
    CCACAAGTAGTGTTAATTTACTTGTCCAGATGCCAATAGTGTTAGCCAATAGTCAAGAGTAAGGGTTTTAATGGCTTCGA
    AATTTTAGCTTGAAAAATTTAAGAGCTGGTCTAAAATAGGGTAAACTAATTGTTTATATATTCTTGACTTAAAATATATG
    AGGGAAATATGAAGTATAAATAAGATTAAGAAAACCTATAGTCCTTGGTCTATTATCATCCCTAATCAAGAGGCAAGCGG
    TCAAAGCTCATTGAGCTGTGTATGGGGGTGGTTTAGCATATAATTGATTACGTGTTAGTTAAAACAAACTAAAAATGAAT
    TAGTATATTTTTACCTCCCCGGCGGCCGCTCGGGCCTGGCGGTTTTTTTTAGTGCGGGTCCCCCTGGCTCCATGGCCTCC
    CAAAAAGGTAGTCGGGGGGGGTCCAGTCCCCTCCCCCCGGAATAACCAATGCAGCAGGCTTCCTTACCCAAAGGAGTAGA
    AAGTTAACTGTCTCAAAGAGCCCGCATGTTGCTAAAATTAGACCAAGATTTCCAGCTAGAATTGGCCAGAAATCTCAAAC
    ATTCTTTAACTATTTTTTTAAGGGAGCTCTCTCACGCCCGATAATTATTTTCTACGGGTTTCCCTAAAACACAAAGATTC
    TAGAGGGGGTACCCGAATTCA
    ATosR _04Z11BS08 _TosRS
    Sequence4|Possible location: Chromosome 6 (by Ma Zhen)
    GGCCCATGTCCAGCCCATCGGATGTCCAGTCCATTGGATCTTGTATCTTGTATATACTTCTATATTGCTAATACTATTGT
    TAGGTTGCAAGTTAGTTAAGAACCATATGTTAGTTTCATGCTTTCTTACGAAATATAATTCAAGGGAAACATTTAAGATA
    ATACAGTTTGCAGATCCTTTTTGTGATTGGCATTGTTGACCACGATTTGTATCATGTAATTTCCATATCTATTACATGGT
    GCAGAACATGTCCAAACAGCTCTCTCTTTTTTTTGGCCATTGAATTGTTTCTTTAACCGATCTTTCTTTTTCTCAACTCT
    TATCGAAACTGAGCTTTGATAACTGATTAATCAATTATTCTTGTTAACCTTTTGTTCTAACAATTGAAGGAAGTCATTCA
    AAATGCTTAATAAATGACTGAGTAATCATAATCCCTTATTTGTTTTTTGCGTGGTTCCATTTCAGGAGGAAATGTATATA
    GCAAGGGCACCTGGTCGTTTAGATGTCATGGGTGGCATTGGTGACTATTCAGGAAGTCTAGTCTTGCAGGTATGCTCAAT
    TGCAGGTGAAAAATCATATTTCTGTACTTGATCTTTAAGTTAGGCGATTTTATTCTCCCTTGACCCCCCCCCCAAACTTT
    TCTCTCCCGGGGGGCCCCCTCCGGGCCCATAAAGAACCGAGTCGTCAACTTTTTTGAAAGTGAAGGAGCACACAGATCTC
    TCGTTTTTTTTTCAATGTACCGTCAGCGAAAGTTTACCAGGGTTGACGGTAGGGGCCTTTCGAGCCCAGTGCCAGGTAAG
    CT
    ATosR _04Z11BS08 _TosRS
    Sequence5|Possible location: Chromosome 6 (by Ma Zhen)
    GGCCCATGTCCAGCCCATCGGATGTCCAGTCCATTGGATCTTGTATCTTGTATATACTTCTATATTGCTAATACTATTGT
    TAGGTTGCAAGTTAGTTAAGAACCATATGTTAGTTTCATGCTTTCTTACGAAATATAATTCAAGGGAAACATTTAAGATA
    ATACAGTTTGCAGATCCTTTTTGTGATTGGCATTGTTGACCACGATTTGTATCATGTAATTTCCATATCTATTACATGGT
    GCAGAACATGTCCAAACAGCTCTCTCTTTTTTTTGGCCATTGAATTGTTTCTTTAACCGATCTTTCTTTTTCTCAACTCT
    TATCGAAACTGAGCTTTGATAACTGATTAATCAATTATTCTTGTTAACCTTTTGTTCTAACAATTGAAGGAAGTCATTCA
    AAATGCTTAATAAATGACTGAGTAATCATAATCCCTTATTTGTTTTTTGCGTGGTTCCATTTCAGGAGGAAATGTATATA
    GCAAGGGCACCTGGTCGTTTAGATGTCATGGGTGGCATTGGTGACTATTCAGGAAGTCTAGTCTTGCAGGTATGCTCAAT
    TGCAGGTGAAAAATCATATTTCTGTACTTGATCTTTAAGTTAGGCGATTTTATTCTCCCTTGACCCCCCCCCCAAACTTT
    TCTCTCCCGGGGGGCCCCCTCCGGGCCCATAAAGAACCGAGTCGTCAACTTTTTTGAAAGTGAAGGAGCACACAGATCTC
    TCGTTTTTTTTTCAATGTACCGTCAGCGAAAGTTTACCAGGGTTGACGGTAGGGGCCTTTCGAGCCCAGTGCCAGGTAAG
    CT
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    Update by Zhang Chengjun, E-mail:rmd_order@mail.hzau.edu.cn
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